rs17288818 chr5:67206882 G>C

Sequence
gaatttctttcaactgtaacaaac[G/C]tggtgcaagttttttgatgacttg
ASB in cell types
MDA-MB-231 (breast adenocarcinoma) germinal center B-cells
ASB for transcription factors
BRD4_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BRD4_HUMAN 2.32 -0.21 8.7·10-31.00 1.90 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol,  lp-pla2 mass,  mitral annular calcium,  years of education
GTEx eQTL Adipose_Subcutaneous,  Artery_Tibial,  Cells_Cultured_fibroblasts,  Esophagus_Gastroesophageal_Junction,  Esophagus_Muscularis,  Muscle_Skeletal,  Whole_Blood

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