rs17293172 chr4:174462033 A>T
- Sequence
gggttagaaaggttaggagttggg[A/T]agagtccagtgactatgaaatttt
- ASB in cell types
- 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ATF3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF3_HUMAN | -0.21 | 2.05 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Colon_Sigmoid, Colon_Transverse, Esophagus_Mucosa, Lung, Skin_Sun_Exposed_Lower_leg, Stomach, Testis, Vagina