rs17301028 chr11:103109595 C>T
- Sequence
aatcatggcgaacgggactgcgga[C/T]gttcggaagctcttcatcttcact
- ASB in cell types
- HepG2 (hepatoblastoma) 22RV1 (prostate carcinoma) HEK293 (embryonic kidney) HCASMC (Human coronary artery smooth muscle cells)
- ASB for transcription factors
- TYY1_HUMAN ANDR_HUMAN TCF21_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TYY1_HUMAN | 1.81 | 0.00 | 1.17 | n/a | No Hit | |||
| ANDR_HUMAN | 3.12 | n/a | 2.00 | 1.65 | Weak Discordant | |||
| TCF21_HUMAN | 1.30 | n/a | 5.00 | n/a | No Hit |
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Motif analysis
