rs17309941 chr9:117160240 A>G
- Sequence
tataaaatgtttcaagtttctaca[A/G]caccatgaaaatcacacaggatct
- ASB in cell types
- MS-1 (Small cell lung carcinoma) GM02630 (Fanconi anemi) LNCaP C4-2B (prostate carcinoma) GM12892 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 3.10 | 0.95 | 1.14 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP microalbuminuria, prop taste detection threshold, simpson-angus scale, urinary albumin-to-creatinine ratio