rs17312325 chrX:69222270 G>T
- Sequence
tctttgccctggcatctgaaaccc[G/T]cctaaacacttggatggagagaca
- ASB in cell types
- LUHMES (lund human mesencephalic cells) GM19099 (female B-cells Lymphoblastoid Cell Lines) HEK293 (embryonic kidney) GM12892 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN PRDM9_HUMAN TEAD4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | -1.42 | 2.08 | 2.40 | n/a | n/a | |||
| CTCF_HUMAN | 2.12 | 2.06 | 1.92 | n/a | No Hit | |||
| PRDM9_HUMAN | n/a | 3.44 | 2.00 | n/a | No Hit | |||
| TEAD4_HUMAN | 3.09 | -2.88 | 1.00 | n/a | No Hit | |||
| HIC1_HUMAN | -2.51 | 2.86 | 1.00 | n/a | No Hit |
Items per page:
1 – 5 of 5