rs17317200 chr7:25456955 C>T
- Sequence
tttcatcttcctgtttatatcttt[C/T]ttgtttacttaagcatgtggcctg
- ASB in cell types
- 22RV1 (prostate carcinoma) primary prostate cancer
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 3.52 | n/a | 1.50 | 0.39 | Weak Discordant | |||
| FOXA1_HUMAN | 2.22 | -0.71 | 2.00 | 4.19 | Discordant |
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Motif analysis
