rs17323034 chr4:118685363 G>A

Sequence
tccagaaggaggcgggacttccgg[G/A]ccaagcgagccaattccggccgcg
ASB in cell types
primary B-CLL cells
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
primary B-CLL cells 2.19 n/a 0.031.00 2.50
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Motif analysis

No data available

Genetic associations

GRASP homa-b,  ldl cholesterol,  obesity with early age of onset (age >2),  total cholesterol
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Brain_Cerebellum,  Brain_Frontal_Cortex_BA9,  Brain_Hippocampus,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Colon_Transverse,  Esophagus_Mucosa,  Heart_Left_Ventricle,  Muscle_Skeletal,  Nerve_Tibial,  Pituitary,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis,  Thyroid,  Whole_Blood

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