rs17326933 chr2:230160308 G>T

Sequence
cttgtccttgcaggagctttaata[G/T]ctcaattcctttccgtctctggag
ASB in cell types
foreskin keratinocyte A549 (lung carcinoma) thyroid gland hepatocytes

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
foreskin keratinocyte 1.15 n/a 1.8·10-71.00 2.83
A549 (lung carcinoma) 0.91 0.10 4.1·10-30.93 2.04
thyroid gland 1.48 -1.14 0.011.00 1.00
hepatocytes 1.28 -0.29 0.051.00 1.00
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Motif analysis

No data available

Genetic associations

GRASP eye color hdl cholesterol refractive error schizophrenia sporadic creutzfeldt-jakob disease tetrology of fallot
GTEx eQTL Nerve_Tibial Testis Whole_Blood

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