rs17330105 chr3:218751 C>A

Sequence
tttttaaatttatgaggaaaaaga[C/A]aacagaaaggaaaaatgggcaaag
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
BHE40_HUMAN ZN687_HUMAN IKZF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BHE40_HUMAN n/a 3.59 1.009.7·10-5 2.00 n/a No Hit
ZN687_HUMAN n/a 2.40 1.000.03 1.00 n/a n/a
IKZF1_HUMAN -3.95 2.15 1.000.03 1.50 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Cerebellum Colon_Sigmoid Skin_Sun_Exposed_Lower_leg Testis

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