rs17338413 chr15:75182595 C>T

Sequence
tgggttttcaaacaaggacggcta[C/T]tgtttaatcgtccccgttgcttgt
ASB in cell types
MS-1 (Small cell lung carcinoma)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.92 -0.26 0.021.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP adiponectin levels,  advanced age-related macular degeneration (choroidal neovascularization) vs. no amd,  fasting blood glucose,  hdl cholesterol
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Tibial,  Nerve_Tibial,  Whole_Blood

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