rs17339850 chr8:100376974 T>C

Sequence
aagccactagaggaaaggaaatac[T/C]gtggagatggcccaattagagaag
ASB in cell types
CD14+ monocytes
ASB for transcription factors
STAT1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN 1.41 -0.27 0.031.00 2.00 0.07 Weak Discordant
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Motif analysis

STAT1_HUMAN Weak Discordant
STAT1_HUMAN pic

Genetic associations

GRASP diastolic blood pressure (dbp),  ldl cholesterol change with statins,  rheumatoid arthritis,  systolic blood pressure (sbp),  total cholesterol change with statins
GTEx eQTL Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Lung,  Pituitary

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