rs17341585 chr5:143491938 G>A

Sequence
gtcataatatgaagggttagataa[G/A]gtaaaagggttgtaaggtaaatta
ASB in cell types
HepG2 (hepatoblastoma) SUM159PT (Triple negative breast cancer)
ASB for transcription factors
ATF7_HUMAN P66A_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ATF7_HUMAN 2.63 -2.25 9.3·10-31.00 1.00 n/a No Hit
P66A_HUMAN 2.76 -2.64 0.011.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP body mass index (bmi) ldl cholesterol rheumatoid arthritis suicide attempts in bipolar disorder (females) total cholesterol years of education
GTEx eQTL Esophagus_Mucosa

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