rs17344446 chr7:97835784 G>A
- Sequence
ttaatatacacatggttcctgagc[G/A]ctggaagaaatttaagaaaaagtt
- ASB in cell types
- CD34+ stem cells-derived erythroblasts THP-1 (acute monocytic leukemia) WA09 (embryonic stem cells)
- ASB for transcription factors
- CTCF_HUMAN SMC1A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.97 | 0.55 | 1.21 | n/a | No Hit | |||
| SMC1A_HUMAN | 1.74 | -1.24 | 1.33 | n/a | n/a |
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