rs17347791 chr10:7628520 G>C

Sequence
gtgtatccatgttgtagcatgtat[G/C]tgcattgtggcatgtgtccatgtg
ASB in cell types
HepG2 (hepatoblastoma) HT1080 (fibrosarcoma)
ASB for transcription factors
MNT_HUMAN SSRP1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MNT_HUMAN 3.88 n/a 1.5·10-61.00 1.33 n/a No Hit
SSRP1_HUMAN 2.97 n/a 0.011.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy) fasting insulin
GTEx eQTL Heart_Atrial_Appendage Muscle_Skeletal Nerve_Tibial

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