rs17349160 chr2:150101006 C>G
- Sequence
tctacagttaataaaacagttgct[C/G]tcttccataatgtactgtgtttgt
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN GATA3_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.20 | 1.16 | 1.53 | n/a | No Hit | |||
| GATA3_HUMAN | 0.68 | 1.52 | 1.69 | n/a | No Hit | |||
| ANDR_HUMAN | 2.05 | 0.26 | 1.56 | n/a | No Hit |
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