rs17354917 chr19:44448685 A>G
- Sequence
tcagtactaacatattcgcgttgt[A/G]gcaaacctgactatattctcaaac
- ASB in cell types
- K562 (myelogenous leukemia) adult erythroblasts
- ASB for transcription factors
- E4F1_HUMAN GABP1_HUMAN HCFC1_HUMAN ATF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| E4F1_HUMAN | 3.37 | n/a | 2.00 | n/a | No Hit | |||
| GABP1_HUMAN | 2.47 | n/a | 2.00 | n/a | n/a | |||
| HCFC1_HUMAN | 1.72 | -0.04 | 2.25 | n/a | n/a | |||
| ATF1_HUMAN | 3.08 | -5.59 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Aorta, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Nerve_Tibial, Thyroid