rs173567 chr5:151239268 T>C

Sequence
ggcgtgaaacaccaccacatccag[T/C]tccacgcagtttttttttaataaa
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) neutrophils from periferal blood
ASB for transcription factors
IKZF1_HUMAN IKZF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN n/a 3.07 1.003.1·10-4 1.00 n/a n/a
IKZF2_HUMAN -2.13 2.27 1.000.03 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP aortic valve calcium
GTEx eQTL Adipose_Visceral_Omentum Colon_Transverse Esophagus_Mucosa Ovary Skin_Not_Sun_Exposed_Suprapubic Testis

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