ADASTRA v6.1.0
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rs173567
chr5:151239268
T
>
C
Sequence
ggcgtgaaacaccaccacatccag[T/C]tccacgcagtttttttttaataaa
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
neutrophils from periferal blood
ASB for transcription factors
IKZF1_HUMAN
IKZF2_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN
n/a
3.07
1.00
3.1·10
-4
1.00
n/a
n/a
IKZF2_HUMAN
-2.13
2.27
1.00
0.03
1.00
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
aortic valve calcium
GTEx eQTL
Adipose_Visceral_Omentum
,
Colon_Transverse
,
Esophagus_Mucosa
,
Ovary
,
Skin_Not_Sun_Exposed_Suprapubic
,
Testis
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)