rs17362007 chr20:56344087 G>A
- Sequence
aggccgcctggtgcaaggtcatcc[G/A]gtgccgggacccgctcctcgcccc
- ASB in cell types
- EOL-1 (Acute myeloid leukemia) GM10847 (female B-cells Lymphoblastoid Cell Lines) CUTLL1 (T-cell lymphoblastic lymphoma 1) epidermal keratinocytes
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.79 | 1.05 | 1.38 | n/a | No Hit | |||
| RAD21_HUMAN | 0.11 | 0.95 | 1.09 | n/a | n/a |
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