rs17365209 chr2:10798991 C>T
- Sequence
gcatgacgtgacaccacaagatgg[C/T]gatgtgagtgaatgactgaggtgg
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.42 | -2.02 | 1.25 | -3.73 | Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Brain_Nucleus_accumbens_basal_ganglia, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic