rs17366136 chr7:22561508 G>T

Sequence
gtccttgagcctgcagccgctgca[G/T]tgctttaataacagtttatccatg
ASB in cell types
GBM39 (Human brain tumor)
ASB for transcription factors
SMC3_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMC3_HUMAN 1.47 n/a 0.021.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

EMBL-EBI coronary atherosclerosis (increased number of diseased vessels) (traffic exposure interaction)
GRASP body mass index (bmi)
GTEx eQTL Artery_Aorta Cells_Cultured_fibroblasts Heart_Left_Ventricle Lung

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