rs17366733 chr7:77460274 A>G

Sequence
tgtccctatttaacgttggaaaaa[A/G]caaggaacagaggtttgttctagg
ASB in cell types
22RV1 (prostate carcinoma) MS-1 (Small cell lung carcinoma)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.14 -0.29 5.1·10-31.00 1.50 0.64 Weak Discordant
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Motif analysis

ANDR_HUMAN Weak Discordant
ANDR_HUMAN pic

Genetic associations

GRASP coronary artery disease (cad)
GTEx eQTL Brain_Anterior_cingulate_cortex_BA24,  Brain_Nucleus_accumbens_basal_ganglia,  Brain_Putamen_basal_ganglia,  Muscle_Skeletal,  Thyroid

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