rs17370655 chr1:160362291 A>T
- Sequence
ggggtcatctcaggaggcctaagg[A/T]gaagtcattagtcggagatgatgc
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney)
- ASB for transcription factors
- COT1_HUMAN ATF3_HUMAN ZNF24_HUMAN ATF7_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| COT1_HUMAN | n/a | 2.28 | 2.00 | 5.23 | Concordant | |||
| ATF3_HUMAN | n/a | 0.86 | 2.00 | 3.86 | Concordant | |||
| ZNF24_HUMAN | -0.29 | 2.90 | 2.25 | n/a | No Hit | |||
| ATF7_HUMAN | n/a | 1.26 | 2.00 | 4.50 | Concordant | |||
| ARI1B_HUMAN | n/a | 1.28 | 2.00 | n/a | n/a |
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Motif analysis
