rs17374902 chr4:94207526 T>C
- Sequence
caagccggcggagacgggtacgaa[T/C]taccatgacaacagcgcgcgcctc
- ASB in cell types
- 22RV1 (prostate carcinoma) SUM159PT (Triple negative breast cancer) CD14+ monocytes Kelly (neuroblastoma)
- ASB for transcription factors
- ANDR_HUMAN STAT1_HUMAN BRD2_HUMAN SMAD3_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.58 | 0.13 | 1.58 | n/a | No Hit | |||
| STAT1_HUMAN | 1.92 | -0.68 | 2.00 | n/a | No Hit | |||
| BRD2_HUMAN | -0.48 | 1.84 | 1.00 | n/a | n/a | |||
| SMAD3_HUMAN | -1.46 | 1.86 | 1.00 | n/a | No Hit |
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