rs17375358 chr1:84599454 G>T

Sequence
aaaatcattagtttcgcttctagg[G/T]aagaatttaaacaattgacaaagc
ASB in cell types
HCASMC (Human coronary artery smooth muscle cells)
ASB for transcription factors
TCF21_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TCF21_HUMAN 2.69 n/a 2.4·10-61.00 3.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP asthma,  autism with verbal ability,  hdl cholesterol
GTEx eQTL Artery_Aorta,  Artery_Tibial,  Cells_Cultured_fibroblasts,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Sun_Exposed_Lower_leg,  Testis,  Whole_Blood

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