rs17383099 chr5:39256435 C>T

Sequence
tcaaggagtctagaatattacgta[C/T]gggttttcatgccgaattagccat
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF2_HUMAN ZN687_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN 1.89 -0.39 0.041.00 1.00 n/a n/a
ZN687_HUMAN 2.27 -2.27 0.041.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP birth weight homa-b ldl cholesterol
GTEx eQTL Skin_Sun_Exposed_Lower_leg

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