rs17386422 chr5:119397769 G>A
- Sequence
atcccgtatagtcaccatcaccac[G/A]aagtattgaaaatctgttttctct
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) MDM(monocyte derived macrophages) SUM159PT (Triple negative breast cancer)
- ASB for transcription factors
- TF65_HUMAN EP300_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TF65_HUMAN | 1.80 | 0.24 | 2.00 | n/a | No Hit | |||
| EP300_HUMAN | 0.16 | 1.54 | 1.08 | n/a | n/a |
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