rs17397332 chr1:161531105 C>G

Sequence
tatatagatatctaaaactccaaa[C/G]cgggtacgcgttggtggtatagtg
ASB in cell types
macrophages pulmonary artery endothelial cell
ASB for transcription factors
CEBPB_HUMAN EP300_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CEBPB_HUMAN 2.60 n/a 2.7·10-31.00 3.00 n/a No Hit
EP300_HUMAN 0.49 -0.19 0.031.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol change with statins,  rheumatoid arthritis,  total cholesterol,  triglycerides
GTEx eQTL Esophagus_Mucosa,  Esophagus_Muscularis,  Lung,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Thyroid,  Whole_Blood

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