rs17400452 chr8:54508542 A>C
- Sequence
ctgcccgctgtgcttggcttgggg[A/C]cagccttgtatattgggccaaaaa
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) CD34+ hematopoietic stem cells
- ASB for transcription factors
- IKZF1_HUMAN IKZF2_HUMAN TIF1B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | -2.41 | 2.65 | 1.00 | n/a | n/a | |||
| IKZF2_HUMAN | -2.17 | 2.23 | 1.00 | n/a | n/a | |||
| TIF1B_HUMAN | -1.94 | 2.72 | 2.00 | n/a | n/a |
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