rs17403531 chr5:143583043 G>A
- Sequence
gcatctgcagctcagcgttgactc[G/A]tcatctctcagtgaataataaagg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) GM12892 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- TBX21_HUMAN MEF2B_HUMAN IKZF2_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TBX21_HUMAN | -3.67 | 3.35 | 1.00 | n/a | No Hit | |||
| MEF2B_HUMAN | -3.41 | 3.30 | 1.00 | n/a | No Hit | |||
| IKZF2_HUMAN | -0.95 | 2.56 | 1.00 | n/a | n/a | |||
| STAG1_HUMAN | -1.02 | 2.20 | 1.17 | n/a | n/a |
Items per page:
1 – 4 of 4