rs17406429 chr1:65624025 A>G
- Sequence
ctagatcattgtactgttttttta[A/G]ttgtggatagtgctctgaattcaa
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.76 | -0.12 | 1.08 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP acute lung injury following major trauma, chronic kidney disease, diastolic blood pressure (dbp), microalbuminuria, refractive error, systolic blood pressure (sbp), total cholesterol change with statins, urinary albumin-to-creatinine ratio