rs17415059 chr1:161739527 C>T

Sequence
attttgtttgtactgtcaattgaa[C/T]gtatggtttgagacatctgggaga
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM12878 (female B-cells lymphoblastoid cell line) 0.72 0.78 0.670.01 1.09
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol,  major depressive disorder,  neuroblastoma (brain cancer),  partial epilepsy,  total cholesterol,  triglycerides change with statins
GTEx eQTL Adipose_Subcutaneous,  Esophagus_Mucosa,  Muscle_Skeletal,  Whole_Blood

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