rs17416130 chr2:54634795 G>A
- Sequence
aggaagtttcctgagttgttgaaa[G/A]agtaccagaacaaagacactgact
- ASB in cell types
- A549 (lung carcinoma) HUVEC-C (HUVEC, umbilical vein endothelial cells)
- ASB for transcription factors
- GCR_HUMAN EP300_HUMAN JUN_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 1.59 | -0.45 | 1.30 | n/a | No Hit | |||
| EP300_HUMAN | 2.04 | -0.42 | 1.22 | n/a | n/a | |||
| JUN_HUMAN | 1.62 | 0.52 | 1.00 | n/a | No Hit |
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