rs17419906 chr7:108367505 T>C
- Sequence
aacatatttgttttcctgaattca[T/C]tgtttgctcagtaatagaattatt
- ASB in cell types
- LNCaP (prostate carcinoma) MCF7 WS8 cells MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.41 | 0.09 | 1.74 | -2.30 | Concordant |
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Motif analysis
