rs17420555 chr5:109580492 G>T
- Sequence
cctaatcttaagccttaggacata[G/T]cttgcttctcatctgataagcaaa
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.57 | -0.23 | 1.08 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP adiponectin levels, ldl cholesterol, ldl cholesterol change with statins, parkinsons disease, total cholesterol change with statins