rs17422897 chr1:96164643 T>C
- Sequence
ataactttgtaatgatatcttgaa[T/C]cttaatggacatggagaatttacc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) MCF7L-P(immortalized breast epithelial cell line) breast tumor
- ASB for transcription factors
- ESR1_HUMAN FOXA1_HUMAN TLE3_HUMAN GCR_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 1.74 | 0.55 | 2.84 | n/a | No Hit | |||
| FOXA1_HUMAN | 1.92 | -0.26 | 2.15 | n/a | No Hit | |||
| TLE3_HUMAN | 2.71 | -1.31 | 3.00 | n/a | n/a | |||
| GCR_HUMAN | 2.90 | n/a | 2.00 | n/a | No Hit |
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