rs17425425 chr2:170363368 A>G
- Sequence
atatcaagtgttttattcattggt[A/G]aacaacagtcagaggctcttgaca
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- FOXK2_HUMAN ZSC29_HUMAN GABP1_HUMAN ETV1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 2.31 | 0.01 | 1.83 | -4.58 | Concordant | |||
| ZSC29_HUMAN | n/a | 3.00 | 3.00 | n/a | No Hit | |||
| GABP1_HUMAN | -2.51 | 2.86 | 1.00 | n/a | n/a | |||
| ETV1_HUMAN | -4.19 | 2.58 | 1.50 | n/a | No Hit | |||
| ILF3_HUMAN | 2.14 | -1.77 | 1.00 | n/a | n/a |
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Motif analysis
