rs17429177 chr7:27359475 G>A

Sequence
agaagaaatgaagaggaggaaatg[G/A]aagaaagaaaaagggaggaggagg
ASB in cell types
EOL-1 (Acute myeloid leukemia) macrophages form periferal blood
ASB for transcription factors
SMRC1_HUMAN SMCA4_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMRC1_HUMAN -2.92 2.81 1.002.6·10-3 1.00 n/a n/a
SMCA4_HUMAN -0.79 2.25 1.008.7·10-3 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP chronic kidney disease,  fasting insulin,  height,  ldl cholesterol,  microalbuminuria,  mitral annular calcium,  total cholesterol

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