rs17438674 chr7:27346972 C>T
- Sequence
ccaccacttagctcagcactgtgt[C/T]cacattcttctattcagatttttt
- ASB in cell types
- ZR-75-1 (invasive ductal carcinoma) 22RV1 (prostate carcinoma) breast tumor
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 2.39 | -1.06 | 2.10 | 0.12 | Weak Discordant | |||
| ANDR_HUMAN | 2.35 | n/a | 2.25 | 5.51 | Discordant | |||
| ESR1_HUMAN | 3.17 | n/a | 2.00 | n/a | No Hit |
Items per page:
1 – 3 of 3
Motif analysis
