rs17439220 chr7:78589992 C>T
- Sequence
acaaactgctatgaaactggagtt[C/T]agaaaacagtgtaaattgagatca
- ASB in cell types
- 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.45 | -0.54 | 1.83 | 0.11 | Weak Discordant |
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Motif analysis
Genetic associations
GRASP ldl cholesterol change with statins, mitral annular calcium, obesity with early age of onset (age >2), total cholesterol change with statins