rs17447211 chr1:182171050 C>G
- Sequence
ttgtctcctaattttctcgtaaga[C/G]gaagtacagctagaaaggagaagc
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia) K562 (myelogenous leukemia) MOLM14 (Adult acute myeloid leukemia) EOL-1 (Acute myeloid leukemia)
- ASB for transcription factors
- CDK8_HUMAN FLI1_HUMAN ETS1_HUMAN SMCA4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CDK8_HUMAN | n/a | 3.60 | 2.00 | n/a | n/a | |||
| FLI1_HUMAN | n/a | 3.40 | 1.00 | 4.93 | Concordant | |||
| ETS1_HUMAN | -2.77 | 2.93 | 1.00 | 5.09 | Concordant | |||
| SMCA4_HUMAN | -1.92 | 2.44 | 1.00 | n/a | n/a | |||
| SPI1_HUMAN | 0.55 | 3.07 | 1.58 | 6.33 | Concordant |
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Motif analysis
