rs17448895 chr19:11601716 A>G

Sequence
gaaggcaccaagtataaaatcttc[A/G]agcatctcaggctgggcgtggtgg
ASB for transcription factors
CTCF_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN n/a 2.19 1.000.03 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP decrease in fev1/fvc ratio (in asthmatic participants),  triglycerides change with statins
GTEx eQTL Artery_Aorta,  Artery_Tibial,  Brain_Caudate_basal_ganglia,  Brain_Cerebellum,  Brain_Frontal_Cortex_BA9,  Brain_Nucleus_accumbens_basal_ganglia,  Colon_Sigmoid,  Muscle_Skeletal,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis

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