rs17450541 chr11:11845268 T>G
- Sequence
ttatctcttctcccatgaaacagg[T/G]ttttaatgtagtcaaacaggtttc
- ASB in cell types
- bronchial epithelial cells 22RV1 (prostate carcinoma)
- ASB for transcription factors
- GRHL2_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GRHL2_HUMAN | 2.43 | -1.65 | 1.00 | -7.38 | Concordant | |||
| ANDR_HUMAN | 2.07 | -4.79 | 2.17 | n/a | No Hit |
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Motif analysis
