rs17457603 chr10:98461171 A>T

Sequence
ctttagagagagataatcagaccc[A/T]tgcccaatagagcagtgaattccc
ASB in cell types
TTC-1240 (Rhabdoid tumor of the kidney)
ASB for transcription factors
SMRC1_HUMAN SMCA4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMRC1_HUMAN -0.18 1.75 1.004.1·10-4 1.40 n/a n/a
SMCA4_HUMAN 0.30 1.52 1.000.04 1.42 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol years of education
GTEx eQTL Cells_Cultured_fibroblasts Lung Muscle_Skeletal Nerve_Tibial Pituitary Prostate Skin_Sun_Exposed_Lower_leg Thyroid

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