rs17461032 chr8:80170842 T>G

Sequence
tgtgttgtgggatttcacccttcc[T/G]acgaaaagctctcttccctcaaac
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN -1.50 1.94 1.001.1·10-3 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP birth weight,  obesity with early age of onset (age >2)
GTEx eQTL Adrenal_Gland,  Breast_Mammary_Tissue,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Thyroid,  Vagina

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