rs17464373 chr1:32848843 G>A
- Sequence
gacgtcattcctgaaatattgggg[G/A]tttttccctcctttatttcattct
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- MTA2_HUMAN IKZF1_HUMAN REQU_HUMAN IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MTA2_HUMAN | 2.87 | -2.94 | 1.00 | n/a | n/a | |||
| IKZF1_HUMAN | 2.17 | -1.00 | 1.00 | n/a | n/a | |||
| REQU_HUMAN | 2.63 | -2.67 | 1.00 | n/a | n/a | |||
| IKZF2_HUMAN | 2.46 | -0.54 | 1.50 | n/a | n/a | |||
| RAD51_HUMAN | 2.42 | -2.26 | 1.00 | n/a | n/a |
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