rs17464408 chr1:203131945 T>A
- Sequence
cagagagtcgtactgaccgagcac[T/A]ggtgaggcgtgtctggggcacccg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- ESR1_HUMAN PAX2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 0.17 | 1.38 | 1.89 | n/a | No Hit | |||
| PAX2_HUMAN | -3.14 | 1.75 | 2.00 | -1.54 | Weak Discordant |
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Motif analysis
