rs17464492 chr8:127330621 A>G

Sequence
tctaacgttcttaaatgctttcca[A/G]taagctttgctggtagcatgccac
ASB in cell types
breast tumor A549 (lung carcinoma)
ASB for transcription factors
GCR_HUMAN ESR1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GCR_HUMAN -1.80 2.59 1.000.03 2.00 n/a No Hit
ESR1_HUMAN 2.63 0.21 0.040.98 1.67 n/a No Hit
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Motif analysis

No data available

Genetic associations

EMBL-EBI prostate-specific antigen levels (conditioned on lead snps)
GRASP fasting blood glucose,  fasting insulin,  homa-b,  homa-ir,  hypertension,  tardive dyskinesia,  waist hip ratio

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