rs1746718 chr1:16614712 T>C
- Sequence
tcttctcactactcagaccaattc[T/C]gttctgctctctctgctccagcca
- ASB in cell types
- HEK293 (embryonic kidney) HepG2 (hepatoblastoma) GM12878 (female B-cells lymphoblastoid cell line) CC-LP-1 (intrahepatic cholangiocarcinoma)
- ASB for transcription factors
- ZN473_HUMAN ZN350_HUMAN HHEX_HUMAN ZXDB_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN473_HUMAN | n/a | 4.08 | 2.00 | n/a | n/a | |||
| ZN350_HUMAN | n/a | 4.11 | 2.00 | n/a | No Hit | |||
| HHEX_HUMAN | -3.07 | 3.12 | 1.00 | n/a | n/a | |||
| ZXDB_HUMAN | n/a | 3.76 | 2.00 | n/a | n/a | |||
| TRI22_HUMAN | n/a | 3.34 | 1.00 | n/a | n/a |
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Motif analysis
