rs17474056 chr2:203122831 C>T
- Sequence
acttaccatggcaaatagtaactg[C/T]ttggttaatgctctagtagtccaa
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.36 | 0.98 | 1.28 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP adiponectin levels, body mass index (bmi), coronary artery disease (cad), cystatin c in serum, ldl cholesterol, rheumatoid arthritis, combined control dataset, gender differentiated, serum butyrylcholinesterase activity, total cholesterol
GTEx eQTL Adipose_Subcutaneous, Adrenal_Gland, Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Stomach, Testis, Thyroid