rs17493078 chr2:38511266 T>C
- Sequence
gactagtttggttccatgatgcaa[T/C]ctgggctgcaaggctgagcaactc
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- ATF4_HUMAN ATF3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF4_HUMAN | 3.54 | n/a | 2.00 | -0.53 | Weak Concordant | |||
| ATF3_HUMAN | 3.06 | n/a | 2.00 | 0.03 | Weak Discordant |
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Motif analysis
